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Date
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Title
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Author
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Reading Time
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Oct 12, 2024
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Exploring the tidyHeatmap R package
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Thomas Sandmann
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21 min
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Aug 21, 2024
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Exploring recipes with LLMs, Ollama and R
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Thomas Sandmann
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14 min
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Apr 17, 2024
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Querying JSON files with AWS Athena and the noctua R package
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Thomas Sandmann
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12 min
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Apr 11, 2024
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Interactive volcano plots with the ggiraph R package
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Thomas Sandmann
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8 min
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Apr 7, 2024
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Conditional panels within shiny modules
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Thomas Sandmann
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4 min
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Apr 3, 2024
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Collaborator-friendly volcano plots with ggplot2
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Thomas Sandmann
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7 min
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Jan 1, 2024
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First steps: building web applications with Django
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Thomas Sandmann
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2 min
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Dec 27, 2023
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Creating virtual environments with pyenv
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Thomas Sandmann
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3 min
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Nov 18, 2023
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Embedding R into Quarto documents with quarto-webr
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Thomas Sandmann
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8 min
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Sep 17, 2023
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Retrieving access-controlled data from NCBI’s dbGAP repository
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Thomas Sandmann
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6 min
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Sep 13, 2023
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Adventures with parquet III: single-cell RNA-seq data and comparison with HDF5-backed arrays
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Thomas Sandmann
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11 min
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Sep 5, 2023
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Adventures with parquet II: Implementing the parquetArraySeed S4 class
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Thomas Sandmann
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11 min
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Aug 31, 2023
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Adventures with parquet: Storing & querying gene expression data
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Thomas Sandmann
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7 min
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Aug 30, 2023
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Organizing sequencing metadata: experimenting with S7
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Thomas Sandmann
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10 min
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Aug 28, 2023
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tourrr: Exploring multi-dimensional data
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Thomas Sandmann
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6 min
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Jul 31, 2023
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Customizing my Quarto website
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Thomas Sandmann
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1 min
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Jul 24, 2023
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Guess the correlation - a first streamlit app
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Thomas Sandmann
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3 min
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Jul 21, 2023
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Grav - a lightweight content management system
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Thomas Sandmann
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1 min
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Jul 21, 2023
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Greg Wilson: Late Night Thoughts on Listening to Ike Quebec (2018)
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Thomas Sandmann
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3 min
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Jun 26, 2023
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Documenting data wrangling with the dtrackr R package
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Thomas Sandmann
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3 min
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May 6, 2023
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Querying parquet files with duckdb
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Thomas Sandmann
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6 min
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Mar 12, 2023
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Lemur: analyzing multi-condition single-cell data
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Thomas Sandmann
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14 min
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Feb 25, 2023
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Simultaneously inserting records into two tables with Postgres CTEs
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Thomas Sandmann
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4 min
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Jan 21, 2023
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Distributing R packages with a drat repository hosted on AWS S3
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Thomas Sandmann
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12 min
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Jan 16, 2023
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QuantSeq RNAseq analysis (1): configuring the nf-core/rnaseq workflow
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Thomas Sandmann
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13 min
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Jan 16, 2023
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QuantSeq RNAseq analysis (2): Exploring nf-core/rnaseq output
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Thomas Sandmann
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4 min
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Jan 16, 2023
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QuantSeq RNAseq analysis (3): Validating published results (no UMIs)
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Thomas Sandmann
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14 min
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Jan 16, 2023
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QuantSeq RNAseq analysis (4): Validating published results (with UMIs)
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Thomas Sandmann
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13 min
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Jan 2, 2023
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SQL and noSQL approaches to creating & querying databases (using R)
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Thomas Sandmann
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13 min
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Dec 27, 2022
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Interactive GSEA results: visualizations with reactable & plotly
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Thomas Sandmann
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27 min
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Dec 24, 2022
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UpSet plots: comparing differential expression across contrasts
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Thomas Sandmann
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8 min
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Dec 22, 2022
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Figure size, layout & tabsets with Quarto
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Thomas Sandmann
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2 min
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Dec 12, 2022
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Full text search in Postgres - the R way
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Thomas Sandmann
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11 min
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Dec 11, 2022
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Updating R the easy way: using rig command line tool
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Thomas Sandmann
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2 min
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Dec 10, 2022
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2022 normconf: lightning talks
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Thomas Sandmann
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1 min
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Dec 8, 2022
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The rlist R package
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Thomas Sandmann
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1 min
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Nov 17, 2022
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Creating custom badges for your README
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Thomas Sandmann
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1 min
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Nov 15, 2022
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Learning nextflow: blasting multiple sequences
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Thomas Sandmann
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8 min
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Nov 14, 2022
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Python type hints
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Thomas Sandmann
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1 min
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Nov 13, 2022
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Fujita et al: Cell-subtype specific effects of genetic variation in the aging and Alzheimer cortex
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Thomas Sandmann
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3 min
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Nov 13, 2022
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Refreshing & exporting temporary AWS credentials
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Thomas Sandmann
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3 min
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Nov 12, 2022
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Installing pyroe with conda
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Thomas Sandmann
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1 min
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Nov 12, 2022
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Welcome To My Blog
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Thomas Sandmann
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1 min
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This work is licensed under a Creative Commons Attribution 4.0 International License.